For me, Goretex works pretty well in trail runners in the winter. With a pair of w/b gaiters and some wool socks, I can hike in deep snow and be warm and dry.

In warmer weather, Goretex is just miserable -- hot, sweaty, etc., on my feet. I like light mesh trail runners -- sure they get wet, and then they dry quickly. I'm currently using New Balance 810's, but I've also like the Salomon XA Comp's.

For the Smokies in June you do not need Goretex footwear, IMHO.
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--Ken B